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  5. LOC_Os05g51020.2

LOC_Os05g51020.2


Description : Protein trichome birefringence-like 1 OS=Arabidopsis thaliana (sp|q9lhl6|tbl1_arath : 229.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51020.2
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.02 Archaeplastida
AMTR_s00007p00135110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G29050 TBL38 TRICHOME BIREFRINGENCE-LIKE 38 0.04 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G38320 TBL34 TRICHOME BIREFRINGENCE-LIKE 34 0.03 Archaeplastida
AT2G40160 TBL30 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.04 Archaeplastida
GSVIVT01000843001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01001005001 No alias Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014106001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020682001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024714001 No alias Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030284001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01032748001 No alias Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032800001 No alias Cell wall.hemicellulose.xylan.modification and... 0.05 Archaeplastida
Gb_36284 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
LOC_Os05g39350.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_10436441g0020 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_119111g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_2603g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_31151g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_53397g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_7200g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Archaeplastida
Solyc01g068430.3.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc03g096030.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc04g064740.4.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g052450.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc06g050920.4.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc06g051350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc07g053330.2.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc09g005630.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc09g015350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc10g080550.2.1 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g006990.2.1 No alias Protein trichome birefringence-like 36 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e003120_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e016007_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e017519_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e027860_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e035734_P001 No alias Protein trichome birefringence-like 10 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e038413_P001 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Zm00001e038414_P003 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 7 277
No external refs found!