LOC_Os06g22980.1

Description : mannan synthase (CSLD)

Gene families : OG0001034 (Archaeplastida) Phylogenetic Tree(s): OG0001034_tree ,
OG_05_0000623 (LandPlants) Phylogenetic Tree(s): OG_05_0000623_tree ,
OG_06_0000677 (SeedPlants) Phylogenetic Tree(s): OG_06_0000677_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g22980.1
Cluster	HCCA: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.11	Archaeplastida
AMTR_s00022p00129900	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.13	Archaeplastida
AT2G33100	CSLD1, ATCSLD1	cellulose synthase-like D1	0.05	Archaeplastida
AT3G03050	ATCSLD3, KJK, CSLD3	cellulose synthase-like D3	0.02	Archaeplastida
AT4G38190	ATCSLD4, CSLD4	cellulose synthase like D4	0.07	Archaeplastida
AT5G16910	ATCSLD2, CSLD2	cellulose-synthase like D2	0.04	Archaeplastida
GSVIVT01013057001	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	Archaeplastida
GSVIVT01021798001	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.12	Archaeplastida
Gb_02801	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Gb_39671	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
LOC_Os06g02180.1	No alias	mannan synthase (CSLD)	0.04	Archaeplastida
LOC_Os10g42750.1	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
Mp2g05640.1	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Mp2g05660.1	No alias	catalytic component CesA of cellulose synthase complex....	0.04	Archaeplastida
Mp2g05670.1	No alias	catalytic component CesA of cellulose synthase complex....	0.04	Archaeplastida
Mp5g24530.1	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Mp5g24550.1	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
Pp3c14_26100V3.1	No alias	cellulose synthase-like D3	0.05	Archaeplastida
Pp3c17_22380V3.1	No alias	cellulose synthase-like D3	0.07	Archaeplastida
Pp3c1_41250V3.1	No alias	cellulose synthase-like D3	0.07	Archaeplastida
Pp3c1_41400V3.1	No alias	cellulose synthase-like D3	0.04	Archaeplastida
Pp3c2_1280V3.1	No alias	cellulose synthase-like D3	0.05	Archaeplastida
Pp3c2_1330V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Smo83878	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	Archaeplastida
Solyc01g067520.3.1	No alias	mannan synthase (CSLD)	0.07	Archaeplastida
Solyc03g097050.3.1	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
Solyc05g053560.4.1	No alias	mannan synthase (CSLD)	0.06	Archaeplastida
Solyc08g005280.2.1	No alias	mannan synthase (CSLD)	0.01	Archaeplastida
Solyc10g074620.3.1	No alias	mannan synthase (CSLD)	0.08	Archaeplastida
Zm00001e002486_P001	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
Zm00001e004304_P002	No alias	mannan synthase (CSLD)	0.09	Archaeplastida
Zm00001e036680_P001	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
Zm00001e037015_P002	No alias	mannan synthase (CSLD)	0.16	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	IEP	Neighborhood
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	239	1002

External Links

No external refs found!

LOC_Os06g22980.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation