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  5. LOC_Os06g30901.1

LOC_Os06g30901.1


Description : Protein SWEETIE OS=Arabidopsis thaliana (sp|f4hrs2|swtie_arath : 1049.0)


Gene families : OG0002919 (Archaeplastida) Phylogenetic Tree(s): OG0002919_tree ,
OG_05_0002651 (LandPlants) Phylogenetic Tree(s): OG_05_0002651_tree ,
OG_06_0003330 (SeedPlants) Phylogenetic Tree(s): OG_06_0003330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g30901.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G67140 SWEETIE HEAT repeat-containing protein 0.1 Archaeplastida
Cre16.g684100 No alias Protein SWEETIE OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031064001 No alias Protein SWEETIE OS=Arabidopsis thaliana 0.11 Archaeplastida
MA_10437139g0010 No alias Protein SWEETIE OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_5424g0010 No alias Protein SWEETIE OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp4g20870.1 No alias Protein SWEETIE OS=Arabidopsis thaliana... 0.13 Archaeplastida
Pp3c15_3000V3.1 No alias HEAT repeat-containing protein 0.07 Archaeplastida
Smo445001 No alias Protein SWEETIE OS=Arabidopsis thaliana 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!