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LOC_Os06g48065.1


Description : RING-H2-class E3 ligase


Gene families : OG0003731 (Archaeplastida) Phylogenetic Tree(s): OG0003731_tree ,
OG_05_0002581 (LandPlants) Phylogenetic Tree(s): OG_05_0002581_tree ,
OG_06_0002001 (SeedPlants) Phylogenetic Tree(s): OG_06_0002001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g48065.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os05g51780.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_2140924g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g007320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e013130_P001 No alias RING-H2-class E3 ligase 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 116 159
No external refs found!