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  5. LOC_Os07g02920.1

LOC_Os07g02920.1


Description : no hits & (original description: none)


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g02920.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00073560 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00027p00086650 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00098p00138460 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s05043p00002670 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G30020 No alias Protein of unknown function, DUF538 0.02 Archaeplastida
GSVIVT01031263001 No alias No description available 0.01 Archaeplastida
Gb_12297 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_40920 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g02700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10435514g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435514g0030 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_128814g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_304675g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_440140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5629g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_73238g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8097895g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_920567g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_924621g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9395g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g02720.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_4780V3.1 No alias Protein of unknown function, DUF538 0.02 Archaeplastida
Pp3c17_12850V3.1 No alias Protein of unknown function, DUF538 0.04 Archaeplastida
Smo130246 No alias No description available 0.02 Archaeplastida
Zm00001e004354_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006697_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e018189_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020996_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032489_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e032715_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 27 139
No external refs found!