LOC_Os07g04700.1


Description : component SNAPC4 of SNAP snRNA transcription factor complex. transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0006168 (LandPlants) Phylogenetic Tree(s): OG_05_0006168_tree ,
OG_06_0005818 (SeedPlants) Phylogenetic Tree(s): OG_06_0005818_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g04700.1
Cluster HCCA: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00105p00025610 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
LOC_Os12g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10426233g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp3g02830.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Smo81360 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014203_P004 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041535_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 495 540
IPR001005 SANT/Myb 290 381
IPR001005 SANT/Myb 547 591
IPR001005 SANT/Myb 390 434
IPR001005 SANT/Myb 444 486
No external refs found!