1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g12240.1

LOC_Os07g12240.1


Description : no hits & (original description: none)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0013022 (SeedPlants) Phylogenetic Tree(s): OG_06_0013022_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g12240.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00186360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.03 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G41090 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.02 Archaeplastida
AT4G37010 CEN2 centrin 2 0.03 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_15095 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_23652 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g04360.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os12g41110.1 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida
MA_472945g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20450.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c14_8590V3.1 No alias calmodulin 5 0.01 Archaeplastida
Pp3c16_23390V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.01 Archaeplastida
Smo91501 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Smo96597 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.04 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.06 Archaeplastida
Zm00001e018064_P001 No alias Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.05 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
No external refs found!