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Description : siRNA-integrating factor (AGO)
Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0001060 (LandPlants) Phylogenetic Tree(s): OG_05_0001060_tree ,
OG_06_0001214 (SeedPlants) Phylogenetic Tree(s): OG_06_0001214_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os07g16224.1 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00049370 | evm_27.TU.AmTr_v1... | Chromatin organisation.DNA methylation.canonical... | 0.02 | Archaeplastida | |
| AT2G27880 | AGO5 | Argonaute family protein | 0.03 | Archaeplastida | |
| AT2G32940 | AGO6 | Argonaute family protein | 0.03 | Archaeplastida | |
| GSVIVT01029383001 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.03 | Archaeplastida | |
| Gb_34718 | No alias | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os02g58490.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida | |
| MA_118377g0010 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida | |
| Mp1g18110.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | Archaeplastida | |
| Pp3c19_20670V3.1 | No alias | Argonaute family protein | 0.02 | Archaeplastida | |
| Zm00001e017367_P001 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
| Zm00001e029696_P001 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida | |
| Zm00001e033643_P006 | No alias | siRNA-integrating factor (AGO) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
| CC | GO:0030289 | protein phosphatase 4 complex | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003165 | Piwi | 16 | 324 |
| No external refs found! |