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  5. LOC_Os07g31000.1

LOC_Os07g31000.1


Description : no hits & (original description: none)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g31000.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.02 Archaeplastida
AMTR_s00066p00062930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Archaeplastida
AMTR_s00127p00016340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 Archaeplastida
AT1G74400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT1G74600 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Archaeplastida
AT3G14330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01015461001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
MA_385322g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 Archaeplastida
Smo150748 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
Smo444974 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.02 Archaeplastida
Smo78092 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 Archaeplastida
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.02 Archaeplastida
Zm00001e007133_P001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Zm00001e015517_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019038_P001 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.01 Archaeplastida
Zm00001e023289_P001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.02 Archaeplastida
Zm00001e032679_P001 No alias RNA editing factor (OTP80) 0.03 Archaeplastida
Zm00001e039180_P001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!