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  5. LOC_Os07g46180.1

LOC_Os07g46180.1


Description : transcription factor (HUA2)


Gene families : OG0001669 (Archaeplastida) Phylogenetic Tree(s): OG0001669_tree ,
OG_05_0001314 (LandPlants) Phylogenetic Tree(s): OG_05_0001314_tree ,
OG_06_0004840 (SeedPlants) Phylogenetic Tree(s): OG_06_0004840_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g46180.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HUA2... 0.06 Archaeplastida
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.12 Archaeplastida
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.1 Archaeplastida
GSVIVT01011100001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.14 Archaeplastida
GSVIVT01012049001 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.06 Archaeplastida
Gb_39860 No alias transcription factor (HUA2) 0.06 Archaeplastida
MA_3338g0010 No alias transcription factor (HUA2) 0.04 Archaeplastida
MA_6096998g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6999g0010 No alias Protein HUA2-LIKE 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_9328225g0010 No alias Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9359526g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp8g15320.1 No alias transcription factor (HUA2) 0.12 Archaeplastida
Pp3c11_11950V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.04 Archaeplastida
Pp3c7_13020V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.06 Archaeplastida
Pp3c7_13060V3.1 No alias Tudor/PWWP/MBT domain-containing protein 0.08 Archaeplastida
Smo404055 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.06 Archaeplastida
Smo414202 No alias RNA biosynthesis.transcriptional activation.HUA2... 0.03 Archaeplastida
Solyc02g014115.1.1 No alias transcription factor (HUA2) 0.1 Archaeplastida
Solyc02g014130.3.1 No alias ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.14 Archaeplastida
Solyc09g064840.4.1 No alias transcription factor (HUA2) 0.15 Archaeplastida
Zm00001e001720_P002 No alias transcription factor (HUA2) 0.12 Archaeplastida
Zm00001e024276_P001 No alias transcription factor (HUA2) 0.1 Archaeplastida
Zm00001e029104_P001 No alias transcription factor (HUA2) 0.14 Archaeplastida
Zm00001e038169_P004 No alias transcription factor (HUA2) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000313 PWWP_dom 24 108
No external refs found!