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  5. LOC_Os08g08160.1

LOC_Os08g08160.1


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0017472 (SeedPlants) Phylogenetic Tree(s): OG_06_0017472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g08160.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT1G61660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_26693 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_40387 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os04g41570.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g150101.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g014120.3.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e012002_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e021661_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025623_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!