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  5. LOC_Os08g16050.1

LOC_Os08g16050.1


Description : Tetraspanin-7 OS=Arabidopsis thaliana (sp|q9sud4|tet7_arath : 214.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g16050.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197500 evm_27.TU.AmTr_v1... Protein TORNADO 2 OS=Arabidopsis thaliana 0.08 Archaeplastida
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00101p00124120 evm_27.TU.AmTr_v1... Tetraspanin-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.03 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.06 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.03 Archaeplastida
GSVIVT01023726001 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00679 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_25195 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_25198 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g34460.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_13870g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_139843g0010 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_24323g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo266767 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g059390.3.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc04g049080.4.1 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g072480.2.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g038410.2.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030929_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e032372_P001 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e034206_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 8 258
No external refs found!