AT1G31280 (AGO2)

Aliases : AGO2

Description : Argonaute family protein

Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0002747 (LandPlants) Phylogenetic Tree(s): OG_05_0002747_tree ,
OG_06_0002302 (SeedPlants) Phylogenetic Tree(s): OG_06_0002302_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31280
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
AT2G27040	AGO4, OCP11	Argonaute family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00020961.9	No alias	Protein argonaute 18 OS=Oryza sativa subsp. japonica	0.01	Archaeplastida
LOC_Os02g58490.1	No alias	RIS-Complex miRNA recruiting factor (AGO1)	0.02	Archaeplastida
LOC_Os04g06770.2	No alias	siRNA-integrating factor (AGO)	0.02	Archaeplastida
LOC_Os04g47870.1	No alias	RIS-Complex miRNA recruiting factor (AGO1)	0.03	Archaeplastida
MA_118377g0010	No alias	RIS-Complex miRNA recruiting factor (AGO1)	0.02	Archaeplastida
MA_14457g0020	No alias	Protein argonaute 4B OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Pp3c18_9600V3.1	No alias	Argonaute family protein	0.03	Archaeplastida
Zm00001e010349_P002	No alias	Protein argonaute 18 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e025496_P001	No alias	siRNA-integrating factor (AGO)	0.03	Archaeplastida
Zm00001e032609_P001	No alias	siRNA-integrating factor (AGO)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
MF	GO:0035197	siRNA binding	IDA	Interproscan
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051607	defense response to virus	IMP	Interproscan
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0061980	regulatory RNA binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	Neighborhood
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
CC	GO:0005730	nucleolus	IEP	Neighborhood
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
CC	GO:0009295	nucleoid	IEP	Neighborhood
BP	GO:0009687	abscisic acid metabolic process	IEP	Neighborhood
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010351	lithium ion transport	IEP	Neighborhood
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015385	sodium:proton antiporter activity	IEP	Neighborhood
MF	GO:0015491	cation:cation antiporter activity	IEP	Neighborhood
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
BP	GO:0035725	sodium ion transmembrane transport	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043288	apocarotenoid metabolic process	IEP	Neighborhood
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
MF	GO:0099516	ion antiporter activity	IEP	Neighborhood
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Neighborhood
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR014811	ArgoL1	317	366
IPR032474	Argonaute_N	174	306
IPR003165	Piwi	668	962
IPR003100	PAZ_dom	381	491
IPR032472	ArgoL2	509	555

External Links

No external refs found!

AT1G31280 (AGO2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation