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  5. LOC_Os08g37570.1

LOC_Os08g37570.1


Description : U-box domain-containing protein 15 OS=Arabidopsis thaliana (sp|q681n2|pub15_arath : 548.0)


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0006387 (SeedPlants) Phylogenetic Tree(s): OG_06_0006387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g37570.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 evm_27.TU.AmTr_v1... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.13 Archaeplastida
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00153p00035720 evm_27.TU.AmTr_v1... U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.04 Archaeplastida
AT1G23030 No alias ARM repeat superfamily protein 0.02 Archaeplastida
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.05 Archaeplastida
AT5G01830 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.1 Archaeplastida
GSVIVT01007275001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01009896001 No alias U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01016225001 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023893001 No alias U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.02 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Gb_29129 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os03g16824.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
MA_104819g0010 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
MA_1773g0020 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.01 Archaeplastida
MA_27512g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
MA_29517g0010 No alias U-box domain-containing protein 12 OS=Oryza sativa... 0.02 Archaeplastida
MA_9917294g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c17_580V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c23_15760V3.1 No alias plant U-box 13 0.03 Archaeplastida
Pp3c23_8770V3.1 No alias plant U-box 14 0.04 Archaeplastida
Pp3c9_17047V3.1 No alias plant U-box 13 0.03 Archaeplastida
Smo231208 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo415326 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g007640.3.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Solyc04g050780.2.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Solyc04g082440.4.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g056450.4.1 No alias U-box domain-containing protein 9 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g008390.2.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Solyc11g066040.2.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Solyc12g094610.3.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e003398_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e013323_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.09 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 269 340
IPR000225 Armadillo 395 433
IPR000225 Armadillo 477 514
No external refs found!