AT1G31310

Description : hydroxyproline-rich glycoprotein family protein

Gene families : OG0000269 (Archaeplastida) Phylogenetic Tree(s): OG0000269_tree ,
OG_05_0001686 (LandPlants) Phylogenetic Tree(s): OG_05_0001686_tree ,
OG_06_0003415 (SeedPlants) Phylogenetic Tree(s): OG_06_0003415_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31310
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00016810	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
GSVIVT01026222001	No alias	No description available	0.09	Archaeplastida
Gb_02208	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os03g46350.1	No alias	no hits & (original description: none)	0.08	Archaeplastida
LOC_Os04g57530.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_174370g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_174370g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp6g15470.1	No alias	Trihelix transcription factor ASR3 OS=Arabidopsis...	0.03	Archaeplastida
Mp7g11500.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Pp3c15_4190V3.1	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
Pp3c4_22830V3.1	No alias	Homeodomain-like superfamily protein	0.02	Archaeplastida
Pp3c7_23130V3.1	No alias	hydroxyproline-rich glycoprotein family protein	0.05	Archaeplastida
Smo402580	No alias	Trihelix transcription factor ASR3 OS=Arabidopsis thaliana	0.03	Archaeplastida
Smo73941	No alias	No description available	0.02	Archaeplastida
Solyc02g030460.2.1	No alias	no hits & (original description: none)	0.1	Archaeplastida
Solyc02g069390.2.1	No alias	no hits & (original description: none)	0.11	Archaeplastida
Zm00001e006592_P002	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e012318_P001	No alias	no hits & (original description: none)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	Neighborhood
BP	GO:0001708	cell fate specification	IEP	Neighborhood
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003725	double-stranded RNA binding	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
BP	GO:0006346	methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0006473	protein acetylation	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008810	cellulase activity	IEP	Neighborhood
BP	GO:0009554	megasporogenesis	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009786	regulation of asymmetric cell division	IEP	Neighborhood
BP	GO:0009798	axis specification	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0009942	longitudinal axis specification	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
CC	GO:0009986	cell surface	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010016	shoot system morphogenesis	IEP	Neighborhood
BP	GO:0010047	fruit dehiscence	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010148	transpiration	IEP	Neighborhood
BP	GO:0010158	abaxial cell fate specification	IEP	Neighborhood
BP	GO:0010160	formation of animal organ boundary	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0016925	protein sumoylation	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
CC	GO:0030139	endocytic vesicle	IEP	Neighborhood
BP	GO:0030155	regulation of cell adhesion	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0031048	chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0031386	protein tag	IEP	Neighborhood
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042127	regulation of cell proliferation	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0048281	inflorescence morphogenesis	IEP	Neighborhood
BP	GO:0048366	leaf development	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048439	flower morphogenesis	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048497	maintenance of floral organ identity	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0048653	anther development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048829	root cap development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0051302	regulation of cell division	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
BP	GO:0090700	maintenance of plant organ identity	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000027	regulation of animal organ morphogenesis	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G31310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation