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  5. AT1G31320

AT1G31320 (LBD4)


Aliases : LBD4

Description : LOB domain-containing protein 4


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31320
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.04 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.04 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.05 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.07 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01020353001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_16918 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19384 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_19388 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19720 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_21467 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_23794 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_40684 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g07480.2 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os03g17810.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
LOC_Os05g27980.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_127139g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_292200g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
MA_9412105g0010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Mp4g10500.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp5g17820.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp7g00650.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp7g14810.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c12_5930V3.1 No alias LOB domain-containing protein 27 0.02 Archaeplastida
Pp3c15_22780V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c19_19400V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c19_19610V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.02 Archaeplastida
Solyc02g069440.3.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc05g048740.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g071660.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc11g008830.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e019004_P002 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e030195_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0001666 response to hypoxia IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004022 alcohol dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004457 lactate dehydrogenase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004707 MAP kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008413 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0009823 cytokinin catabolic process IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010089 xylem development IEP Neighborhood
BP GO:0010218 response to far red light IEP Neighborhood
BP GO:0010223 secondary shoot formation IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
MF GO:0010297 heteropolysaccharide binding IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010346 shoot axis formation IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
MF GO:0010487 thermospermine synthase activity IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016768 spermine synthase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0019177 dihydroneopterin triphosphate pyrophosphohydrolase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0042447 hormone catabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048759 xylem vessel member cell differentiation IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051749 indole acetic acid carboxyl methyltransferase activity IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071731 response to nitric oxide IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0090506 axillary shoot meristem initiation IEP Neighborhood
BP GO:0097366 response to bronchodilator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1905177 tracheary element differentiation IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
BP GO:2000603 regulation of secondary growth IEP Neighborhood
BP GO:2000605 positive regulation of secondary growth IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 13 110
No external refs found!