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  5. AMTR_s00009p00257990

AMTR_s00009p00257990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.298

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00257990
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.03 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.02 Archaeplastida
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.03 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g28280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g49986.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g39470.1 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_101790g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_62488g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7032764g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_97537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g074920.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053240.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!