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  5. LOC_Os08g42380.1

LOC_Os08g42380.1


Description : component Tim8 of inner mitochondrion membrane TIM22 insertion system


Gene families : OG0002261 (Archaeplastida) Phylogenetic Tree(s): OG0002261_tree ,
OG_05_0003344 (LandPlants) Phylogenetic Tree(s): OG_05_0003344_tree ,
OG_06_0003742 (SeedPlants) Phylogenetic Tree(s): OG_06_0003742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42380.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00198440 evm_27.TU.AmTr_v1... Protein translocation.mitochondrion.inner mitochondrion... 0.06 Archaeplastida
AT1G61570 TIM13 translocase of the inner mitochondrial membrane 13 0.09 Archaeplastida
AT5G50810 TIM8 translocase inner membrane subunit 8 0.09 Archaeplastida
GSVIVT01008600001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.1 Archaeplastida
Gb_35115 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.03 Archaeplastida
MA_119926g0010 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.05 Archaeplastida
MA_15606g0010 No alias component Tim13 of inner mitochondrion membrane TIM22... 0.03 Archaeplastida
Pp3c22_9040V3.1 No alias translocase inner membrane subunit 8 0.04 Archaeplastida
Pp3c25_10700V3.1 No alias translocase of the inner mitochondrial membrane 13 0.04 Archaeplastida
Smo82076 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.09 Archaeplastida
Solyc03g097640.3.1 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.03 Archaeplastida
Solyc06g072600.3.1 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.06 Archaeplastida
Zm00001e003692_P001 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.13 Archaeplastida
Zm00001e021994_P001 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004217 Tim10-like 23 83
No external refs found!