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  5. LOC_Os09g26900.1

LOC_Os09g26900.1


Description : copper cation channel (COPT). copper transporter (COPT)


Gene families : OG0000928 (Archaeplastida) Phylogenetic Tree(s): OG0000928_tree ,
OG_05_0003161 (LandPlants) Phylogenetic Tree(s): OG_05_0003161_tree ,
OG_06_0008855 (SeedPlants) Phylogenetic Tree(s): OG_06_0008855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26900.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AT2G37925 COPT4 copper transporter 4 0.03 Archaeplastida
Gb_28691 No alias copper cation channel (COPT). copper transporter (COPT) 0.02 Archaeplastida
MA_103240g0010 No alias copper cation channel (COPT). copper transporter (COPT) 0.04 Archaeplastida
Solyc09g014870.1.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
Zm00001e019694_P001 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
Zm00001e024515_P001 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0035434 copper ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007274 Cop_transporter 4 131
No external refs found!