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  5. LOC_Os10g23900.1

LOC_Os10g23900.1


Description : aromatic L-amino acid decarboxylase


Gene families : OG0000816 (Archaeplastida) Phylogenetic Tree(s): OG0000816_tree ,
OG_05_0000577 (LandPlants) Phylogenetic Tree(s): OG_05_0000577_tree ,
OG_06_0000434 (SeedPlants) Phylogenetic Tree(s): OG_06_0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g23900.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00139650 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.04 Archaeplastida
AMTR_s00024p00230050 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
AMTR_s00024p00231980 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
AMTR_s00092p00055440 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.04 Archaeplastida
AMTR_s00092p00059730 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.02 Archaeplastida
GSVIVT01026384001 No alias Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
Gb_10830 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
LOC_Os08g04540.1 No alias aromatic L-amino acid decarboxylase 0.04 Archaeplastida
Mp7g06530.1 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida
Pp3c4_30950V3.1 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Archaeplastida
Pp3s64_90V3.1 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Archaeplastida
Solyc03g045010.1.1 No alias Tyrosine decarboxylase 2 OS=Petroselinum crispum... 0.04 Archaeplastida
Solyc03g045020.4.1 No alias aromatic L-amino acid decarboxylase 0.07 Archaeplastida
Solyc07g054280.1.1 No alias aromatic L-amino acid decarboxylase 0.05 Archaeplastida
Zm00001e000632_P001 No alias aromatic L-amino acid decarboxylase 0.06 Archaeplastida
Zm00001e000634_P001 No alias aromatic L-amino acid decarboxylase 0.08 Archaeplastida
Zm00001e004837_P001 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
Zm00001e021101_P001 No alias aromatic L-amino acid decarboxylase 0.04 Archaeplastida
Zm00001e040289_P001 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 73 452
No external refs found!