LOC_Os10g25850.1

Description : component NF-YA of NF-Y transcription factor complex

Gene families : OG0000500 (Archaeplastida) Phylogenetic Tree(s): OG0000500_tree ,
OG_05_0076595 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0065311 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g25850.1
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01025252001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	Archaeplastida
GSVIVT01032101001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.01	Archaeplastida
Gb_31427	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
Gb_32704	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
Zm00001e005342_P003	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
Zm00001e010744_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0004645	phosphorylase activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
MF	GO:0008184	glycogen phosphorylase activity	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:2001070	starch binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001289	NFYA	68	123

External Links

No external refs found!

LOC_Os10g25850.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation