Description : lysine-specific demethylase (LDL3)
Gene families : OG0004598 (Archaeplastida) Phylogenetic Tree(s): OG0004598_tree ,
OG_05_0003372 (LandPlants) Phylogenetic Tree(s): OG_05_0003372_tree ,
OG_06_0004545 (SeedPlants) Phylogenetic Tree(s): OG_06_0004545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os10g38850.1 | |
Cluster | HCCA: Cluster_257 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G16310 | LDL3 | LSD1-like 3 | 0.05 | Archaeplastida | |
GSVIVT01009833001 | No alias | Lysine-specific histone demethylase 1 homolog 3... | 0.08 | Archaeplastida | |
GSVIVT01009834001 | No alias | Lysine-specific histone demethylase 1 homolog 3... | 0.07 | Archaeplastida | |
MA_120420g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_120420g0020 | No alias | lysine-specific demethylase (LDL3) | 0.07 | Archaeplastida | |
Pp3c1_1170V3.1 | No alias | LSD1-like 3 | 0.05 | Archaeplastida | |
Pp3c1_6380V3.1 | No alias | LSD1-like 3 | 0.04 | Archaeplastida | |
Pp3c2_35420V3.1 | No alias | LSD1-like 3 | 0.05 | Archaeplastida | |
Pp3c2_35433V3.1 | No alias | LSD1-like 3 | 0.04 | Archaeplastida | |
Smo405878 | No alias | Chromatin organisation.histone modifications.histone... | 0.04 | Archaeplastida | |
Solyc04g081100.3.1 | No alias | lysine-specific demethylase (LDL3) | 0.04 | Archaeplastida | |
Zm00001e002184_P001 | No alias | lysine-specific demethylase (LDL3) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
BP | GO:0055114 | oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
No external refs found! |