1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00262920

AMTR_s00010p00262920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.481

No description available


Gene families : OG0004522 (Archaeplastida) Phylogenetic Tree(s): OG0004522_tree ,
OG_05_0003115 (LandPlants) Phylogenetic Tree(s): OG_05_0003115_tree ,
OG_06_0001884 (SeedPlants) Phylogenetic Tree(s): OG_06_0001884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00262920
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
MA_4582g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g087990.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g119470.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g036500.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016841 ammonia-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR012870 DUF1666 265 351
No external refs found!