1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00011p00235480

AMTR_s00011p00235480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.125

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree ,
OG_06_0000178 (SeedPlants) Phylogenetic Tree(s): OG_06_0000178_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00235480
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00061860 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
AMTR_s00023p00051360 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 Archaeplastida
AMTR_s00029p00185120 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 Archaeplastida
AMTR_s00055p00190270 evm_27.TU.AmTr_v1... Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
AMTR_s00069p00085210 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.06 Archaeplastida
AT1G18140 LAC1, ATLAC1 laccase 1 0.02 Archaeplastida
AT2G29130 ATLAC2, LAC2 laccase 2 0.03 Archaeplastida
AT2G30210 LAC3 laccase 3 0.05 Archaeplastida
AT2G38080 LAC4, IRX12,... Laccase/Diphenol oxidase family protein 0.04 Archaeplastida
AT2G40370 LAC5 laccase 5 0.03 Archaeplastida
AT2G46570 LAC6 laccase 6 0.03 Archaeplastida
AT3G09220 LAC7 laccase 7 0.02 Archaeplastida
AT5G01190 LAC10 laccase 10 0.03 Archaeplastida
AT5G03260 LAC11 laccase 11 0.02 Archaeplastida
AT5G05390 LAC12 laccase 12 0.04 Archaeplastida
AT5G07130 LAC13 laccase 13 0.03 Archaeplastida
AT5G60020 ATLAC17, LAC17 laccase 17 0.02 Archaeplastida
GSVIVT01001603001 No alias Laccase-14 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01001604001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01001614001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01012343001 No alias Laccase-14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016372001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01016513001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01025077001 No alias Cell wall.lignin.monolignol conjugation and... 0.03 Archaeplastida
GSVIVT01032744001 No alias Laccase-12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01034139001 No alias Cell wall.lignin.monolignol conjugation and... 0.04 Archaeplastida
Gb_11065 No alias Laccase-11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_14613 No alias lignin laccase 0.04 Archaeplastida
Gb_34469 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g61160.1 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g62600.1 No alias Putative laccase-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os03g16610.1 No alias lignin laccase 0.02 Archaeplastida
LOC_Os03g18640.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.03 Archaeplastida
LOC_Os05g38390.1 No alias Putative laccase-11 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os05g38420.1 No alias lignin laccase 0.03 Archaeplastida
LOC_Os11g01730.1 No alias Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os11g47390.1 No alias Laccase-21 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os12g01730.1 No alias Laccase-23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os12g15920.1 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10191230g0010 No alias No annotation 0.04 Archaeplastida
MA_10430789g0010 No alias Putative laccase-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10432715g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432961g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434084g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434090g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436564g0010 No alias Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_118833g0010 No alias lignin laccase 0.02 Archaeplastida
MA_122769g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_192464g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19643g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_208475g0010 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_213397g0020 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_33057g0010 No alias lignin laccase 0.03 Archaeplastida
MA_33288g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_57140g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_57140g0020 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_63042g0010 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_7035458g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_76578g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_812936g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_8866650g0010 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.08 Archaeplastida
Pp3c18_3460V3.1 No alias laccase 12 0.05 Archaeplastida
Pp3c1_13930V3.1 No alias laccase 12 0.02 Archaeplastida
Pp3c6_3290V3.1 No alias laccase 2 0.02 Archaeplastida
Smo105894 No alias Laccase-4 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
Smo404075 No alias Laccase-12 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo95740 No alias Laccase-13 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Solyc05g043360.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.05 Archaeplastida
Solyc05g050540.4.1 No alias Laccase-6 OS=Arabidopsis thaliana (sp|q9zpy2|lac6_arath... 0.05 Archaeplastida
Solyc05g052340.4.1 No alias Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.04 Archaeplastida
Solyc05g052390.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g052400.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g050530.3.1 No alias Laccase-12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g076330.3.1 No alias lignin laccase 0.02 Archaeplastida
Solyc07g049460.3.1 No alias Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.04 Archaeplastida
Solyc09g010990.3.1 No alias lignin laccase 0.03 Archaeplastida
Solyc09g011970.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g014240.4.1 No alias lignin laccase 0.04 Archaeplastida
Solyc10g076830.2.1 No alias lignin laccase 0.04 Archaeplastida
Solyc10g085090.3.1 No alias No annotation 0.03 Archaeplastida
Solyc12g056820.2.1 No alias Laccase-15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e001209_P001 No alias lignin laccase 0.02 Archaeplastida
Zm00001e019303_P001 No alias lignin laccase 0.03 Archaeplastida
Zm00001e019315_P001 No alias lignin laccase 0.03 Archaeplastida
Zm00001e019316_P001 No alias lignin laccase 0.02 Archaeplastida
Zm00001e019412_P001 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021354_P001 No alias Laccase-25 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e028767_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e028830_P002 No alias Laccase-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e031826_P001 No alias lignin laccase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 426 539
IPR001117 Cu-oxidase 160 306
IPR011707 Cu-oxidase_3 31 144
No external refs found!