LOC_Os12g02470.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0011016 (SeedPlants) Phylogenetic Tree(s): OG_06_0011016_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g02470.1
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.04	Archaeplastida
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	Archaeplastida
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.03	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g53260.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os07g02060.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os10g18099.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10428091g0010	No alias	transcription factor (WRKY)	0.06	Archaeplastida
MA_10429098g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_109104g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_186293g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_20468g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_2121641g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_2535g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5558504g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_934202g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Pp3c12_4260V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c1_40230V3.1	No alias	WRKY DNA-binding protein 11	0.02	Archaeplastida
Solyc12g056745.1.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e006407_P002	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e039306_P003	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004097	catechol oxidase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Neighborhood
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	129	189

External Links

No external refs found!

LOC_Os12g02470.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation