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  5. LOC_Os12g05860.1

LOC_Os12g05860.1


Description : Germin-like protein 12-2 OS=Oryza sativa subsp. japonica (sp|q2qxj2|gl122_orysj : 434.0)


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05860.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00024p00231430 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00074p00061830 evm_27.TU.AmTr_v1... Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00127600 evm_27.TU.AmTr_v1... Germin-like protein 8-2 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
AMTR_s00114p00037920 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AT1G02335 GL22 germin-like protein subfamily 2 member 2 precursor 0.03 Archaeplastida
AT1G18970 GLP4 germin-like protein 4 0.08 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT3G05950 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT3G10080 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G62020 GLP10 germin-like protein 10 0.03 Archaeplastida
AT4G14630 GLP9 germin-like protein 9 0.11 Archaeplastida
AT5G38910 No alias RmlC-like cupins superfamily protein 0.09 Archaeplastida
AT5G39110 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
AT5G39120 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT5G39150 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
AT5G39180 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
AT5G39190 GER2, ATGER2, GLP2A germin-like protein 2 0.03 Archaeplastida
GSVIVT01000057001 No alias No description available 0.02 Archaeplastida
GSVIVT01000061001 No alias No description available 0.06 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000068001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01008094001 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01031079001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031080001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01031085001 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_18733 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Gb_34489 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g18170.1 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g58980.1 No alias Germin-like protein 3-7 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os08g09020.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g35750.1 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10308226g0010 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10325916g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10386538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436609g0010 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 Archaeplastida
MA_3366g0010 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_42727g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_5449g0010 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_740063g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g01610.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01620.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.05 Archaeplastida
Mp5g02530.1 No alias Oxalate oxidase 2 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp5g02540.1 No alias Germin-like protein 3-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.05 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MpVg01130.1 No alias No annotation 0.02 Archaeplastida
Pp3c10_21090V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c17_21150V3.1 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
Pp3c17_21180V3.1 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
Pp3c17_21250V3.1 No alias RmlC-like cupins superfamily protein 0.06 Archaeplastida
Pp3c17_21300V3.1 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
Pp3c18_18960V3.1 No alias germin-like protein 8 0.02 Archaeplastida
Pp3c1_28020V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c1_28050V3.1 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c23_1420V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1430V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1480V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c3_16510V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo109767 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo109968 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo227294 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo271728 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo423673 No alias No description available 0.03 Archaeplastida
Smo92738 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g088260.3.1 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.06 Archaeplastida
Solyc03g113570.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g113580.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g006500.4.1 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g089990.3.1 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g090020.4.1 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g090040.3.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.06 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e006055_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.08 Archaeplastida
Zm00001e014725_P001 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e017425_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021627_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021628_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e021630_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e021635_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021639_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e032256_P001 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e039952_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e039953_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e039958_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e039959_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e040617_P001 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 216
No external refs found!