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  5. AT1G04050

AT1G04050 (SDG13, SUVR1)


Aliases : SDG13, SUVR1

Description : homolog of SU(var)3-9 1


Gene families : OG0002157 (Archaeplastida) Phylogenetic Tree(s): OG0002157_tree ,
OG_05_0001573 (LandPlants) Phylogenetic Tree(s): OG_05_0001573_tree ,
OG_06_0024891 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04050
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT5G43990 SDG18, SUVR2 SET-domain containing protein lysine methyltransferase... 0.03 Archaeplastida
Gb_29987 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
MA_106792g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Pp3c3_14470V3.1 No alias SET-domain containing protein lysine methyltransferase... 0.02 Archaeplastida
Solyc06g083760.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e003847_P002 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e007509_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e022012_P001 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
CC GO:0009705 plant-type vacuole membrane IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 578 696
IPR018848 WIYLD_domain 6 59
IPR007728 Pre-SET_dom 410 558
No external refs found!