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  5. LOC_Os12g44000.1

LOC_Os12g44000.1


Description : Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana (sp|q9fmm0|ubc18_arath : 265.0)


Gene families : OG0002269 (Archaeplastida) Phylogenetic Tree(s): OG0002269_tree ,
OG_05_0002124 (LandPlants) Phylogenetic Tree(s): OG_05_0002124_tree ,
OG_06_0002060 (SeedPlants) Phylogenetic Tree(s): OG_06_0002060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g44000.1
Cluster HCCA: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Gb_10336 No alias Probable ubiquitin-conjugating enzyme E2 18... 0.03 Archaeplastida
Mp1g00400.1 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.04 Archaeplastida
Solyc04g080810.4.1 No alias Probable ubiquitin-conjugating enzyme E2 16... 0.03 Archaeplastida
Zm00001e003346_P001 No alias Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e017907_P001 No alias Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 19 154
No external refs found!