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  5. Smo101548

Smo101548


Description : Polyubiquitin 3 OS=Arabidopsis thaliana


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000113 (LandPlants) Phylogenetic Tree(s): OG_05_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo101548
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT3G62250 UBQ5 ubiquitin 5 0.02 Archaeplastida
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
MA_10435699g0020 No alias component RPS27a of SSU proteome 0.02 Archaeplastida
MA_4507637g0010 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.02 Archaeplastida
Pp3c12_18200V3.1 No alias polyubiquitin 10 0.02 Archaeplastida
Zm00001e000965_P001 No alias component RPL40 of LSU proteome component 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016842 amidine-lyase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 64
No external refs found!