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  5. AMTR_s00012p00249210

AMTR_s00012p00249210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.242

No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00249210
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251220 No alias No description available 0.03 Archaeplastida
AMTR_s00004p00044490 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00013p00252720 No alias No description available 0.02 Archaeplastida
AMTR_s00033p00196950 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00033p00217360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00039p00101600 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00060p00142680 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00078p00132690 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00081p00034970 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00090p00053400 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00214p00028540 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s03891p00003510 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!