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  5. Smo107900

Smo107900


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component


Gene families : OG0001193 (Archaeplastida) Phylogenetic Tree(s): OG0001193_tree ,
OG_05_0001066 (LandPlants) Phylogenetic Tree(s): OG_05_0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo107900
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
AT1G05520 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
AT2G21630 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
AT3G23660 No alias Sec23/Sec24 protein transport family protein 0.06 Archaeplastida
AT4G14160 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
AT5G43670 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Cre03.g180850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Gb_40586 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
LOC_Os03g53140.2 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
MA_10427000g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.06 Archaeplastida
Pp3c10_18520V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.02 Archaeplastida
Solyc01g081070.3.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Solyc05g053830.3.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
Zm00001e008888_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Zm00001e012060_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 406 507
No external refs found!