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  5. AMTR_s00012p00263720

AMTR_s00012p00263720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.347

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0014982 (SeedPlants) Phylogenetic Tree(s): OG_06_0014982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00263720
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029124001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 Archaeplastida
Pp3c2_30710V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 34 150
No external refs found!