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  5. Smo127267

Smo127267


Description : Cell cycle.interphase.DNA replication.preinitiation.TOP2 DNA topoisomerase


Gene families : OG0003355 (Archaeplastida) Phylogenetic Tree(s): OG0003355_tree ,
OG_05_0004398 (LandPlants) Phylogenetic Tree(s): OG_05_0004398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo127267

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00101630 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.11 Archaeplastida
AT3G23890 TOPII, ATTOPII topoisomerase II 0.09 Archaeplastida
Cpa|evm.model.tig00021432.55 No alias DNA topoisomerase 2 OS=Pisum sativum 0.03 Archaeplastida
Cpa|evm.model.tig00021433.2 No alias DNA topoisomerase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre01.g009250 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.02 Archaeplastida
GSVIVT01032138001 No alias Cell cycle.interphase.DNA replication.preinitiation.TOP2... 0.1 Archaeplastida
Gb_11673 No alias DNA topoisomerase (TOP2) 0.08 Archaeplastida
Gb_12824 No alias DNA topoisomerase 2 OS=Pisum sativum (sp|o24308|top2_pea : 112.0) 0.09 Archaeplastida
LOC_Os02g47150.1 No alias DNA topoisomerase (TOP2) 0.03 Archaeplastida
MA_133272g0010 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
MA_6634g0010 No alias DNA topoisomerase (TOP2) 0.07 Archaeplastida
Mp3g13420.1 No alias DNA topoisomerase (TOP2) 0.08 Archaeplastida
Pp3c18_20260V3.1 No alias topoisomerase II 0.06 Archaeplastida
Pp3c19_3610V3.1 No alias topoisomerase II 0.06 Archaeplastida
Solyc01g087500.3.1 No alias DNA topoisomerase (TOP2) 0.09 Archaeplastida
Zm00001e015542_P001 No alias DNA topoisomerase (TOP2) 0.09 Archaeplastida
Zm00001e023296_P001 No alias DNA topoisomerase (TOP2) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013506 Topo_IIA_bsu_dom2 253 409
No external refs found!