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  4. Sequence
  5. Smo137825

Smo137825


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL2 component


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137825
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.18 Archaeplastida
ATCG01310 RPL2.2 ribosomal protein L2 0.18 Archaeplastida
Cre07.g348850 No alias 50S ribosomal protein L2, chloroplastic OS=Chara vulgaris 0.02 Archaeplastida
GSVIVT01023979001 No alias No description available 0.02 Archaeplastida
Gb_17010 No alias component mtRPL2-C-terminal of large ribosomal subunit... 0.03 Archaeplastida
Gb_17475 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 Archaeplastida
Gb_24024 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 Archaeplastida
Gb_25047 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.03 Archaeplastida
Gb_37512 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Mp1g19370.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Pp3c2_23491V3.1 No alias Ribosomal protein L2 family 0.04 Archaeplastida
Solyc00g500035.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500079.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc00g500297.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc09g050067.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc10g012217.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc10g018610.2.1 No alias No annotation 0.29 Archaeplastida
Zm00001e015952_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018695_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e022990_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e024936_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030112_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e036845_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.07 Archaeplastida
Zm00001e042046_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e042062_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e042089_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e042370_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.03 Archaeplastida
Zm00001e042445_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida
Zm00001e042446_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 43 118
No external refs found!