Coexpression cluster: Cluster_27 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 13.85% (9/65) 5.44 0.0 0.0
GO:0005198 structural molecule activity 13.85% (9/65) 5.13 0.0 0.0
GO:0009521 photosystem 7.69% (5/65) 6.84 0.0 0.0
GO:0044436 thylakoid part 9.23% (6/65) 6.01 0.0 0.0
GO:0098796 membrane protein complex 9.23% (6/65) 4.88 0.0 2e-06
GO:0019684 photosynthesis, light reaction 4.62% (3/65) 8.01 0.0 3e-06
GO:0044425 membrane part 10.77% (7/65) 3.86 1e-06 1.2e-05
GO:0005575 cellular_component 18.46% (12/65) 2.56 1e-06 1.5e-05
GO:0009522 photosystem I 4.62% (3/65) 7.01 1e-06 2.4e-05
GO:0009161 ribonucleoside monophosphate metabolic process 6.15% (4/65) 5.06 6e-06 5e-05
GO:0009167 purine ribonucleoside monophosphate metabolic process 6.15% (4/65) 5.06 6e-06 5e-05
GO:0009126 purine nucleoside monophosphate metabolic process 6.15% (4/65) 5.06 6e-06 5e-05
GO:0009123 nucleoside monophosphate metabolic process 6.15% (4/65) 5.06 6e-06 5e-05
GO:0009199 ribonucleoside triphosphate metabolic process 6.15% (4/65) 5.14 5e-06 5.1e-05
GO:0009141 nucleoside triphosphate metabolic process 6.15% (4/65) 5.14 5e-06 5.1e-05
GO:0009144 purine nucleoside triphosphate metabolic process 6.15% (4/65) 5.14 5e-06 5.1e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 6.15% (4/65) 5.14 5e-06 5.1e-05
GO:0055114 oxidation-reduction process 13.85% (9/65) 2.75 7e-06 5.2e-05
GO:0006091 generation of precursor metabolites and energy 6.15% (4/65) 5.03 7e-06 5.2e-05
GO:0008152 metabolic process 29.23% (19/65) 1.67 4e-06 5.7e-05
GO:0032991 protein-containing complex 9.23% (6/65) 3.83 4e-06 6.1e-05
GO:0046034 ATP metabolic process 6.15% (4/65) 5.17 5e-06 6.1e-05
GO:0019693 ribose phosphate metabolic process 6.15% (4/65) 4.75 1.5e-05 9.3e-05
GO:0009150 purine ribonucleotide metabolic process 6.15% (4/65) 4.75 1.5e-05 9.3e-05
GO:0017144 drug metabolic process 6.15% (4/65) 4.75 1.5e-05 9.3e-05
GO:0009259 ribonucleotide metabolic process 6.15% (4/65) 4.75 1.5e-05 9.3e-05
GO:0009117 nucleotide metabolic process 6.15% (4/65) 4.67 1.9e-05 0.000104
GO:0006163 purine nucleotide metabolic process 6.15% (4/65) 4.67 1.9e-05 0.000104
GO:0006753 nucleoside phosphate metabolic process 6.15% (4/65) 4.67 1.9e-05 0.000104
GO:0072521 purine-containing compound metabolic process 6.15% (4/65) 4.64 2e-05 0.000109
GO:0044464 cell part 12.31% (8/65) 2.77 2.1e-05 0.00011
GO:0015986 ATP synthesis coupled proton transport 3.08% (2/65) 7.84 2.5e-05 0.000123
GO:0015985 energy coupled proton transport, down electrochemical gradient 3.08% (2/65) 7.84 2.5e-05 0.000123
GO:0055086 nucleobase-containing small molecule metabolic process 6.15% (4/65) 4.4 3.9e-05 0.000186
GO:1901135 carbohydrate derivative metabolic process 6.15% (4/65) 4.25 5.8e-05 0.00027
GO:0019637 organophosphate metabolic process 6.15% (4/65) 3.93 0.00014 0.000628
GO:0044424 intracellular part 9.23% (6/65) 2.86 0.000179 0.000742
GO:0009523 photosystem II 3.08% (2/65) 6.61 0.000174 0.000743
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 4.62% (3/65) 4.8 0.000171 0.000751
GO:0034062 5'-3' RNA polymerase activity 4.62% (3/65) 4.68 0.000217 0.000856
GO:0097747 RNA polymerase activity 4.62% (3/65) 4.68 0.000217 0.000856
GO:0016651 oxidoreductase activity, acting on NAD(P)H 3.08% (2/65) 6.42 0.000232 0.000895
GO:1902600 proton transmembrane transport 3.08% (2/65) 5.84 0.000543 0.002044
GO:0016779 nucleotidyltransferase activity 4.62% (3/65) 4.2 0.000588 0.002164
GO:0015078 proton transmembrane transporter activity 3.08% (2/65) 5.72 0.00064 0.002254
GO:0015077 monovalent inorganic cation transmembrane transporter activity 3.08% (2/65) 5.72 0.00064 0.002254
GO:0008150 biological_process 30.77% (20/65) 1.08 0.000679 0.002341
GO:0140098 catalytic activity, acting on RNA 4.62% (3/65) 3.88 0.001128 0.003806
GO:0044281 small molecule metabolic process 6.15% (4/65) 3.01 0.001541 0.004992
GO:0022890 inorganic cation transmembrane transporter activity 3.08% (2/65) 5.1 0.001539 0.005087
GO:0008324 cation transmembrane transporter activity 3.08% (2/65) 4.78 0.002407 0.007645
GO:0031360 intrinsic component of thylakoid membrane 1.54% (1/65) 8.42 0.002917 0.008147
GO:0045333 cellular respiration 1.54% (1/65) 8.42 0.002917 0.008147
GO:0015980 energy derivation by oxidation of organic compounds 1.54% (1/65) 8.42 0.002917 0.008147
GO:0015977 carbon fixation 1.54% (1/65) 8.42 0.002917 0.008147
GO:0009060 aerobic respiration 1.54% (1/65) 8.42 0.002917 0.008147
GO:0031361 integral component of thylakoid membrane 1.54% (1/65) 8.42 0.002917 0.008147
GO:0015672 monovalent inorganic cation transport 3.08% (2/65) 4.67 0.002805 0.008739
GO:0098660 inorganic ion transmembrane transport 3.08% (2/65) 4.25 0.004951 0.011794
GO:0098662 inorganic cation transmembrane transport 3.08% (2/65) 4.25 0.004951 0.011794
GO:0098655 cation transmembrane transport 3.08% (2/65) 4.25 0.004951 0.011794
GO:0009142 nucleoside triphosphate biosynthetic process 3.08% (2/65) 4.29 0.004684 0.011857
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.08% (2/65) 4.29 0.004684 0.011857
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.08% (2/65) 4.29 0.004684 0.011857
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.08% (2/65) 4.29 0.004684 0.011857
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.08% (2/65) 4.29 0.004684 0.011857
GO:0006754 ATP biosynthetic process 3.08% (2/65) 4.29 0.004684 0.011857
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.62% (3/65) 3.14 0.004862 0.012118
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.08% (2/65) 4.17 0.005504 0.012214
GO:0015075 ion transmembrane transporter activity 3.08% (2/65) 4.17 0.005504 0.012214
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.08% (2/65) 4.17 0.005504 0.012214
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.08% (2/65) 4.17 0.005504 0.012214
GO:0009124 nucleoside monophosphate biosynthetic process 3.08% (2/65) 4.17 0.005504 0.012214
GO:0009260 ribonucleotide biosynthetic process 3.08% (2/65) 4.03 0.00669 0.014261
GO:0009152 purine ribonucleotide biosynthetic process 3.08% (2/65) 4.03 0.00669 0.014261
GO:0046390 ribose phosphate biosynthetic process 3.08% (2/65) 4.03 0.00669 0.014261
GO:1901293 nucleoside phosphate biosynthetic process 3.08% (2/65) 3.93 0.00765 0.015299
GO:0009165 nucleotide biosynthetic process 3.08% (2/65) 3.93 0.00765 0.015299
GO:0006164 purine nucleotide biosynthetic process 3.08% (2/65) 3.93 0.00765 0.015299
GO:0006139 nucleobase-containing compound metabolic process 6.15% (4/65) 2.38 0.007405 0.015379
GO:0034220 ion transmembrane transport 3.08% (2/65) 3.96 0.007323 0.015408
GO:0072522 purine-containing compound biosynthetic process 3.08% (2/65) 3.9 0.007982 0.01577
GO:1901137 carbohydrate derivative biosynthetic process 3.08% (2/65) 3.81 0.009019 0.017604
GO:0006725 cellular aromatic compound metabolic process 6.15% (4/65) 2.26 0.00986 0.019016
GO:0022857 transmembrane transporter activity 3.08% (2/65) 3.69 0.01049 0.019992
GO:0046483 heterocycle metabolic process 6.15% (4/65) 2.21 0.011075 0.020862
GO:1901360 organic cyclic compound metabolic process 6.15% (4/65) 2.19 0.011457 0.021334
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 1.54% (1/65) 6.42 0.011617 0.021386
GO:0005215 transporter activity 3.08% (2/65) 3.56 0.012466 0.022691
GO:0034641 cellular nitrogen compound metabolic process 6.15% (4/65) 2.11 0.013931 0.025076
GO:0009055 electron transfer activity 3.08% (2/65) 3.4 0.015483 0.027564
GO:0090407 organophosphate biosynthetic process 3.08% (2/65) 3.38 0.015937 0.028064
GO:0044237 cellular metabolic process 12.31% (8/65) 1.28 0.016444 0.028645
GO:0016020 membrane 4.62% (3/65) 2.33 0.022077 0.038047
GO:0034654 nucleobase-containing compound biosynthetic process 3.08% (2/65) 3.08 0.023411 0.039922
GO:0006812 cation transport 3.08% (2/65) 3.03 0.025049 0.04227
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_2 0.097 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_61 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_107 0.214 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_92 0.236 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_151 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_199 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_221 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_30 0.048 Archaeplastida Compare
Gingko biloba HCCA Cluster_78 0.146 Archaeplastida Compare
Gingko biloba HCCA Cluster_89 0.06 Archaeplastida Compare
Gingko biloba HCCA Cluster_297 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_44 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_83 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_93 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_109 0.073 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.149 Archaeplastida Compare
Zea mays HCCA Cluster_172 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_255 0.092 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_2 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_8 0.113 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_140 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_154 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_82 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_137 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_54 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_4 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_125 0.333 Archaeplastida Compare
Oryza sativa HCCA Cluster_233 0.047 Archaeplastida Compare
Oryza sativa HCCA Cluster_238 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_63 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_122 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_3 0.069 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.118 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.055 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_24 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_83 0.257 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_87 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_90 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_93 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_113 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.052 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_172 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_174 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_191 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_199 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_287 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_312 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_20 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_25 0.075 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.045 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.031 Archaeplastida Compare
Sequences (65) (download table)

InterPro Domains

GO Terms

Family Terms