1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo137874

Smo137874


Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.large subunit


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137874
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272640 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba 0.11 Archaeplastida
AMTR_s00012p00184400 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase large chain... 0.12 Archaeplastida
AMTR_s00606p00006850 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.11 Archaeplastida
ATCG00490 RBCL ribulose-bisphosphate carboxylases 0.19 Archaeplastida
GSVIVT01013856001 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.06 Archaeplastida
GSVIVT01022403001 No alias Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban 0.06 Archaeplastida
Gb_07644 No alias Ribulose bisphosphate carboxylase large chain... 0.14 Archaeplastida
Gb_15502 No alias Ribulose bisphosphate carboxylase large chain... 0.14 Archaeplastida
Gb_18620 No alias Ribulose bisphosphate carboxylase large chain... 0.05 Archaeplastida
Gb_25934 No alias Ribulose bisphosphate carboxylase large chain... 0.03 Archaeplastida
Gb_34523 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.12 Archaeplastida
Gb_37464 No alias Ribulose bisphosphate carboxylase large chain... 0.15 Archaeplastida
LOC_Os01g58020.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.23 Archaeplastida
LOC_Os05g35330.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.06 Archaeplastida
LOC_Os10g21268.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.22 Archaeplastida
LOC_Os11g32770.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.14 Archaeplastida
LOC_Os12g10580.1 No alias component psRPS15 of small ribosomal subunit proteome 0.24 Archaeplastida
Mp3g01300.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc00g500063.1.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.28 Archaeplastida
Solyc07g021200.1.1 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.29 Archaeplastida
Solyc12g062540.3.1 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.03 Archaeplastida
Solyc12g062550.1.1 No alias Ribulose bisphosphate carboxylase large chain OS=Solanum... 0.03 Archaeplastida
Zm00001e002755_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.08 Archaeplastida
Zm00001e003902_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Zm00001e010393_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e031080_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.19 Archaeplastida
Zm00001e036792_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.03 Archaeplastida
Zm00001e042029_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.21 Archaeplastida
Zm00001e042051_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.2 Archaeplastida
Zm00001e042083_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.22 Archaeplastida
Zm00001e042095_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.2 Archaeplastida
Zm00001e042148_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e042237_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Zm00001e042351_P001 No alias no hits & (original description: none) 0.15 Archaeplastida
Zm00001e042372_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Sorghum... 0.02 Archaeplastida
Zm00001e042403_P001 No alias large subunit of ribulose-1,5-bisphosphat... 0.2 Archaeplastida
Zm00001e042465_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015977 carbon fixation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR017443 RuBisCO_lsu_fd_N 14 133
No external refs found!