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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS16 component
Gene families : OG0002343 (Archaeplastida) Phylogenetic Tree(s): OG0002343_tree ,
OG_05_0002210 (LandPlants) Phylogenetic Tree(s): OG_05_0002210_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo138369 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00161540 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | Archaeplastida | |
| AMTR_s00046p00076360 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
| AT2G09990 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.12 | Archaeplastida | |
| Cpa|evm.model.tig00000123.14 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.13 | Archaeplastida | |
| Cre13.g573351 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.22 | Archaeplastida | |
| GSVIVT01017923001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.17 | Archaeplastida | |
| Gb_05712 | No alias | component RPS16 of SSU proteome | 0.13 | Archaeplastida | |
| LOC_Os11g03400.1 | No alias | component RPS16 of SSU proteome | 0.1 | Archaeplastida | |
| LOC_Os12g03090.1 | No alias | component RPS16 of SSU proteome | 0.1 | Archaeplastida | |
| MA_2656g0010 | No alias | 40S ribosomal protein S16 OS=Gossypium hirsutum... | 0.12 | Archaeplastida | |
| MA_32670g0010 | No alias | component RPS16 of SSU proteome | 0.18 | Archaeplastida | |
| Mp1g07720.1 | No alias | component RPS16 of SSU proteome | 0.21 | Archaeplastida | |
| Mp1g14290.1 | No alias | component RPS16 of SSU proteome | 0.21 | Archaeplastida | |
| Pp3c18_1350V3.1 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.19 | Archaeplastida | |
| Pp3c19_22410V3.1 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.22 | Archaeplastida | |
| Pp3c21_20630V3.1 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.2 | Archaeplastida | |
| Pp3c22_21090V3.1 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.18 | Archaeplastida | |
| Pp3c9_4180V3.1 | No alias | Ribosomal protein S5 domain 2-like superfamily protein | 0.16 | Archaeplastida | |
| Solyc01g068530.3.1 | No alias | component RPS16 of SSU proteome | 0.14 | Archaeplastida | |
| Solyc04g026100.1.1 | No alias | component RPS16 of SSU proteome | 0.19 | Archaeplastida | |
| Solyc05g005690.1.1 | No alias | component RPS16 of SSU proteome | 0.15 | Archaeplastida | |
| Zm00001e009230_P001 | No alias | component RPS16 of SSU proteome | 0.09 | Archaeplastida | |
| Zm00001e020865_P003 | No alias | component RPS16 of SSU proteome | 0.11 | Archaeplastida | |
| Zm00001e039245_P001 | No alias | component RPS16 of SSU proteome | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Neighborhood |
| CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000754 | Ribosomal_S9 | 12 | 144 |
| No external refs found! |