1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo144921

Smo144921


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component


Gene families : OG0002752 (Archaeplastida) Phylogenetic Tree(s): OG0002752_tree ,
OG_05_0002866 (LandPlants) Phylogenetic Tree(s): OG_05_0002866_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo144921
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00162800 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
AT3G25520 OLI5, RPL5A, PGY3, ATL5 ribosomal protein L5 0.18 Archaeplastida
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.17 Archaeplastida
Cpa|evm.model.tig00000194.49 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Cre14.g621450 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01038188001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Gb_16695 No alias component RPL5 of LSU proteome component 0.04 Archaeplastida
LOC_Os01g67134.1 No alias component RPL5 of LSU proteome component 0.13 Archaeplastida
MA_70965g0010 No alias component RPL5 of LSU proteome component 0.1 Archaeplastida
Mp4g15800.1 No alias component RPL5 of LSU proteome component 0.18 Archaeplastida
Pp3c11_6420V3.1 No alias ribosomal protein L5 B 0.15 Archaeplastida
Pp3c1_7160V3.1 No alias ribosomal protein L5 B 0.11 Archaeplastida
Pp3c2_31540V3.1 No alias ribosomal protein L5 B 0.06 Archaeplastida
Pp3c7_25660V3.1 No alias ribosomal protein L5 B 0.17 Archaeplastida
Solyc06g007670.4.1 No alias component RPL5 of LSU proteome component 0.18 Archaeplastida
Solyc06g082870.4.1 No alias component RPL5 of LSU proteome component 0.11 Archaeplastida
Solyc09g020130.3.1 No alias component RPL5 of LSU proteome component 0.12 Archaeplastida
Zm00001e000256_P001 No alias component RPL5 of LSU proteome component 0.08 Archaeplastida
Zm00001e018972_P001 No alias component RPL5 of LSU proteome component 0.06 Archaeplastida
Zm00001e028563_P004 No alias component RPL5 of LSU proteome component 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 192 282
No external refs found!