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  5. Smo170330

Smo170330


Description : Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana


Gene families : OG0001461 (Archaeplastida) Phylogenetic Tree(s): OG0001461_tree ,
OG_05_0001765 (LandPlants) Phylogenetic Tree(s): OG_05_0001765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo170330
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00048p00146310 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G08350 No alias Endomembrane protein 70 protein family 0.07 Archaeplastida
AT1G14670 No alias Endomembrane protein 70 protein family 0.05 Archaeplastida
AT2G01970 No alias Endomembrane protein 70 protein family 0.02 Archaeplastida
AT5G37310 No alias Endomembrane protein 70 protein family 0.05 Archaeplastida
Cpa|evm.model.tig00000459.14 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00000459.15 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
Cre16.g675958 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os03g13380.1 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 Archaeplastida
MA_103022g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.06 Archaeplastida
MA_10430999g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g06160.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.06 Archaeplastida
Pp3c12_1640V3.1 No alias Endomembrane protein 70 protein family 0.03 Archaeplastida
Pp3c17_2590V3.1 No alias Endomembrane protein 70 protein family 0.02 Archaeplastida
Pp3c21_16480V3.1 No alias Endomembrane protein 70 protein family 0.04 Archaeplastida
Solyc04g014570.3.1 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.1 Archaeplastida
Solyc05g054040.4.1 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g011910.2.1 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e000978_P002 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e038626_P002 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.11 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004240 EMP70 59 547
No external refs found!