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  5. Smo230724

Smo230724


Description : Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin


Gene families : OG0000516 (Archaeplastida) Phylogenetic Tree(s): OG0000516_tree ,
OG_05_0000996 (LandPlants) Phylogenetic Tree(s): OG_05_0000996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo230724
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.04 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.03 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.05 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.03 Archaeplastida
Cpa|evm.model.tig00001477.10 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.01 Archaeplastida
Gb_37068 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g04790.1 No alias X-type thioredoxin 0.02 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.03 Archaeplastida
Pp3c16_11170V3.1 No alias Thioredoxin superfamily protein 0.02 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.03 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.04 Archaeplastida
Solyc01g008250.3.1 No alias X-type thioredoxin 0.02 Archaeplastida
Solyc12g013810.2.1 No alias M-type thioredoxin 0.03 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 6 104
No external refs found!