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  4. Sequence
  5. Smo236855

Smo236855


Description : ATP synthase subunit beta, chloroplastic OS=Psilotum nudum


Gene families : OG0000722 (Archaeplastida) Phylogenetic Tree(s): OG0000722_tree ,
OG_05_0001384 (LandPlants) Phylogenetic Tree(s): OG_05_0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo236855
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00606p00000120 evm_27.TU.AmTr_v1... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.05 Archaeplastida
ATCG00480 ATPB, PB ATP synthase subunit beta 0.05 Archaeplastida
Cpa|evm.model.tig00001376.3 No alias ATP synthase subunit beta, mitochondrial... 0.01 Archaeplastida
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.01 Archaeplastida
GSVIVT01006210001 No alias ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.06 Archaeplastida
Gb_00175 No alias ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.05 Archaeplastida
Gb_06833 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.05 Archaeplastida
Gb_22349 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 Archaeplastida
Gb_37463 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 Archaeplastida
LOC_Os01g25065.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.08 Archaeplastida
LOC_Os03g55874.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
LOC_Os05g35320.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.16 Archaeplastida
LOC_Os10g21266.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.07 Archaeplastida
LOC_Os12g10570.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.07 Archaeplastida
Zm00001e003901_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042030_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042068_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042081_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e042082_P001 No alias ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.12 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0046034 ATP metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 1 56
No external refs found!