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  4. Sequence
  5. Smo236857

Smo236857


Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.apocytochrome f component PetA


Gene families : OG0002944 (Archaeplastida) Phylogenetic Tree(s): OG0002944_tree ,
OG_05_0002184 (LandPlants) Phylogenetic Tree(s): OG_05_0002184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo236857
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011840 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 Archaeplastida
ATCG00540 PETA photosynthetic electron transfer A 0.26 Archaeplastida
GSVIVT01015185001 No alias Cytochrome f OS=Vitis vinifera 0.04 Archaeplastida
Gb_37933 No alias Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.16 Archaeplastida
Gb_41662 No alias Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.16 Archaeplastida
LOC_Os01g65902.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.31 Archaeplastida
LOC_Os02g24596.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.12 Archaeplastida
LOC_Os06g39738.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.3 Archaeplastida
LOC_Os08g15280.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.06 Archaeplastida
LOC_Os10g21290.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.09 Archaeplastida
Mp1g27760.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc00g500020.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.35 Archaeplastida
Solyc00g500067.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.35 Archaeplastida
Solyc10g045220.1.1 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.34 Archaeplastida
Zm00001e003903_P001 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.05 Archaeplastida
Zm00001e010391_P001 No alias No annotation 0.14 Archaeplastida
Zm00001e015951_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e042028_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e042049_P001 No alias No annotation 0.09 Archaeplastida
Zm00001e042066_P001 No alias No annotation 0.24 Archaeplastida
Zm00001e042084_P001 No alias No annotation 0.24 Archaeplastida
Zm00001e042147_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e042161_P001 No alias apocytochrome f component PetA of cytochrome b6/f complex 0.07 Archaeplastida
Zm00001e042498_P001 No alias Cytochrome f OS=Zea mays (sp|p46617|cyf_maize : 342.0) 0.15 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0031361 integral component of thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR024094 Cyt_f_lg_dom 14 168
No external refs found!