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  5. Smo266913

Smo266913


Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-3 component


Gene families : OG0003815 (Archaeplastida) Phylogenetic Tree(s): OG0003815_tree ,
OG_05_0004658 (LandPlants) Phylogenetic Tree(s): OG_05_0004658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo266913
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00168080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.02 Archaeplastida
AT1G21720 PBC1 proteasome beta subunit C1 0.02 Archaeplastida
Cre06.g267500 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
GSVIVT01008836001 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Gb_29749 No alias component beta type-3 of 26S proteasome 0.03 Archaeplastida
LOC_Os02g08520.1 No alias component beta type-3 of 26S proteasome 0.02 Archaeplastida
LOC_Os06g43570.1 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida
Mp7g15370.1 No alias component beta type-3 of 26S proteasome 0.02 Archaeplastida
Solyc04g009410.3.1 No alias component beta type-3 of 26S proteasome 0.03 Archaeplastida
Zm00001e037487_P001 No alias component beta type-3 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 6 189
No external refs found!