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  5. Smo37555

Smo37555


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS10 component


Gene families : OG0001849 (Archaeplastida) Phylogenetic Tree(s): OG0001849_tree ,
OG_05_0001692 (LandPlants) Phylogenetic Tree(s): OG_05_0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo37555
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 Archaeplastida
AMTR_s00017p00221160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT4G25740 No alias RNA binding Plectin/S10 domain-containing protein 0.21 Archaeplastida
AT5G41520 No alias RNA binding Plectin/S10 domain-containing protein 0.17 Archaeplastida
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.28 Archaeplastida
Cpa|evm.model.tig00001164.5 No alias 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica 0.23 Archaeplastida
Cre09.g411100 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
GSVIVT01028854001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Gb_10517 No alias component RPS10 of SSU proteome 0.11 Archaeplastida
LOC_Os01g73160.1 No alias component RPS10 of SSU proteome 0.17 Archaeplastida
LOC_Os04g35090.1 No alias component RPS10 of SSU proteome 0.22 Archaeplastida
MA_111018g0010 No alias component RPS10 of SSU proteome 0.11 Archaeplastida
MA_314020g0010 No alias component RPS10 of SSU proteome 0.12 Archaeplastida
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.29 Archaeplastida
Pp3c10_21170V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.13 Archaeplastida
Pp3c10_990V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.18 Archaeplastida
Pp3c14_1810V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.25 Archaeplastida
Pp3c1_18400V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.29 Archaeplastida
Pp3c23_13100V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.15 Archaeplastida
Pp3c24_2340V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.17 Archaeplastida
Pp3c2_18620V3.1 No alias RNA binding Plectin/S10 domain-containing protein 0.26 Archaeplastida
Solyc01g099670.3.1 No alias component RPS10 of SSU proteome 0.25 Archaeplastida
Solyc12g096540.2.1 No alias component RPS10 of SSU proteome 0.23 Archaeplastida
Zm00001e008107_P001 No alias component RPS10 of SSU proteome 0.23 Archaeplastida
Zm00001e018554_P001 No alias No annotation 0.19 Archaeplastida
Zm00001e028280_P001 No alias component RPS10 of SSU proteome 0.26 Archaeplastida
Zm00001e040881_P001 No alias component RPS10 of SSU proteome 0.22 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!