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  4. Sequence
  5. Smo419858

Smo419858


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL35 component


Gene families : OG0002158 (Archaeplastida) Phylogenetic Tree(s): OG0002158_tree ,
OG_05_0002518 (LandPlants) Phylogenetic Tree(s): OG_05_0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo419858
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT2G39390 No alias Ribosomal L29 family protein 0.06 Archaeplastida
AT3G09500 No alias Ribosomal L29 family protein 0.08 Archaeplastida
AT3G55170 No alias Ribosomal L29 family protein 0.04 Archaeplastida
AT5G02610 No alias Ribosomal L29 family protein 0.12 Archaeplastida
Cpa|evm.model.tig00000241.79 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
MA_10429159g0020 No alias component RPL35 of LSU proteome component 0.05 Archaeplastida
Mp3g07170.1 No alias component RPL35 of LSU proteome component 0.04 Archaeplastida
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.15 Archaeplastida
Pp3c13_5200V3.1 No alias Ribosomal L29 family protein 0.08 Archaeplastida
Pp3c26_13720V3.1 No alias Ribosomal L29 family protein 0.03 Archaeplastida
Pp3c3_2800V3.1 No alias Ribosomal L29 family protein 0.13 Archaeplastida
Pp3c4_30730V3.1 No alias Ribosomal L29 family protein 0.11 Archaeplastida
Solyc04g010240.3.1 No alias component RPL35 of LSU proteome component 0.15 Archaeplastida
Zm00001e008428_P002 No alias component RPL35 of LSU proteome component 0.08 Archaeplastida
Zm00001e014607_P001 No alias component RPL35 of LSU proteome component 0.09 Archaeplastida
Zm00001e040695_P003 No alias component RPL35 of LSU proteome component 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!