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  5. Smo438421

Smo438421


Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GIF cofactor component


Gene families : OG0001550 (Archaeplastida) Phylogenetic Tree(s): OG0001550_tree ,
OG_05_0001254 (LandPlants) Phylogenetic Tree(s): OG_05_0001254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438421
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036262001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 Archaeplastida
Pp3c13_15090V3.1 No alias GRF1-interacting factor 3 0.03 Archaeplastida
Pp3c3_21060V3.1 No alias GRF1-interacting factor 3 0.02 Archaeplastida
Solyc11g006230.3.1 No alias cofactor component GIF of GRF-GIF transcriptional complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030150 protein import into mitochondrial matrix IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 252 348
No external refs found!