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  5. Smo438784

Smo438784


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL24 component


Gene families : OG0001838 (Archaeplastida) Phylogenetic Tree(s): OG0001838_tree ,
OG_05_0001764 (LandPlants) Phylogenetic Tree(s): OG_05_0001764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438784
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.03 Archaeplastida
Cre09.g391097 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01010601001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
LOC_Os01g59990.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
LOC_Os07g12250.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 Archaeplastida
Mp5g17510.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 Archaeplastida
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.01 Archaeplastida
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.03 Archaeplastida
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.01 Archaeplastida
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.01 Archaeplastida
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.01 Archaeplastida
Solyc09g008800.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
Solyc10g083740.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.05 Archaeplastida
Solyc10g085480.2.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 Archaeplastida
Zm00001e027315_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!