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  5. Smo438861

Smo438861


Description : Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component


Gene families : OG0004940 (Archaeplastida) Phylogenetic Tree(s): OG0004940_tree ,
OG_05_0007713 (LandPlants) Phylogenetic Tree(s): OG_05_0007713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438861
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00267320 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.DSL1... 0.05 Archaeplastida
AT5G24350 No alias CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39... 0.08 Archaeplastida
Cpa|evm.model.tig00000076.139 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.01 Archaeplastida
GSVIVT01038603001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.06 Archaeplastida
Gb_24496 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.05 Archaeplastida
MA_10437135g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.06 Archaeplastida
MA_10437234g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_178977g0010 No alias MAG2-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_37482g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.05 Archaeplastida
MA_719625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g11790.1 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.04 Archaeplastida
Pp3c1_3140V3.1 No alias No annotation 0.05 Archaeplastida
Solyc03g082680.4.1 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.07 Archaeplastida
Zm00001e027951_P001 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013244 Sec39_domain 129 784
No external refs found!