Smo442028


Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0002452 (Archaeplastida) Phylogenetic Tree(s): OG0002452_tree ,
OG_05_0001770 (LandPlants) Phylogenetic Tree(s): OG_05_0001770_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442028
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.05 Archaeplastida
GSVIVT01011044001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
GSVIVT01022020001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
Mp3g05770.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Solyc01g098430.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022175 BCAS3 448 567
No external refs found!