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  5. Smo74992

Smo74992


Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT5 regulatory component


Gene families : OG0003943 (Archaeplastida) Phylogenetic Tree(s): OG0003943_tree ,
OG_05_0003993 (LandPlants) Phylogenetic Tree(s): OG_05_0003993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo74992
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT3G05530 RPT5A, ATS6A.2 regulatory particle triple-A ATPase 5A 0.02 Archaeplastida
Cpa|evm.model.tig00001187.20 No alias 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.02 Archaeplastida
Cre10.g439150 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Gb_01340 No alias regulatory component RPT5 of 26S proteasome 0.03 Archaeplastida
LOC_Os02g56000.1 No alias regulatory component RPT5 of 26S proteasome 0.04 Archaeplastida
LOC_Os06g07630.1 No alias regulatory component RPT5 of 26S proteasome 0.08 Archaeplastida
Mp3g09490.1 No alias regulatory component RPT5 of 26S proteasome 0.06 Archaeplastida
Zm00001e016153_P002 No alias regulatory component RPT5 of 26S proteasome 0.03 Archaeplastida
Zm00001e031055_P001 No alias regulatory component RPT5 of 26S proteasome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 204 336
No external refs found!